All functions |
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Chain size data for borealpox |
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Computes NBBP likelihood surface for given data at given grid |
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Default shape/rate for prior on r_eff |
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Default scale for prior on dispersion |
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Final outbreak size for negative binomial branching process |
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Fit a negative binomial branching process model with Bayesian inference via rstan |
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Fit a negative binomial branching process model with maximum likelihood inference via rstan |
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Measles chain size data used by Blumberg et al. (2014) |
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MERS-CoV chain size data used by Blumberg et al. (2014) |
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Negative binomial parameterization conversion |
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Extinction probability for negative binomial branching process |
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Chain size data for pneumonic plague |
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Prior and prior predictive distributions |
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Ancillary results from high-level validation |
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High-level validation results |
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High-level performance results in simulations |
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Addition of two 1-D base::table objects |