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MIRA
2.0.0
MIRA in Docker Desktop
Getting Started and Installation
Running Genome Assembly with MIRA -- NANOPORE DATA
Running Genome Assembly with MIRA -- ILLUMINA DATA
Data Transfer with Mk1C
Upgrading MIRA Docker Desktop
MIRA-CLI
Quick Start in Ubuntu
PC Getting Started
MAC Getting Started
MIRA installation
Running Genome Assembly with MIRA-CLI -- NANOPORE DATA
Running Genome Assembly with MIRA-CLI -- ILLUMINA DATA
Upgrading MIRA-CLI
Lab Protocols
Sequencing Template Generation
Automated RNA Extraction using QIAcube HT
Multi-segment Reverse Transcription-PCR (MRT-PCR) of Influenza A and B Viruses
Influenza A Virus MRT-PCR
SARS-COV-2 Virus RT-PCR
MRT-PCR Purification using Exonuclease
QIAxcel Sample Preparation and Quality Control Procedure
Illumina Library Preparation and Sequencing
Manual Procedure Illumina DNA Library Preparation
DNA Quantification with Qubit ds DNA High Sensitivity Kit
Performing a MiSeq Next Generation Sequencing Run
Preparation of the DNA Libraries for Loading onto the MiSeq
Oxford Nanopore Library Preparation and Sequencing
Library Preparation and Nanopore Sequencing of Influenza and SARS-COV-2 S-gene Amplicons
Help
FAQs
Troubleshooting
QC Standards
Development Tips
Nanopore Frameshift Correction
Legacy
Retired PC Getting Started
Retired MAC Getting Started
Retired MIRA installation
Retired Data Transfer with Mk1C
Retired Running Genome Assembly -- NANOPORE DATA
Retired Running Genome Assembly -- ILLUMINA DATA
Retired Post MIRA sequence analysis with Nextclade
Change Log
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Automated RNA Extraction using QIAcube HT
Source:
vignettes/automated-rna-extraction.Rmd
automated-rna-extraction.Rmd