Get the watstewater data for a particular source and geographic granularity

Wrapper function around the worker functions. Outputs a different dataframe depending on if the pipeline is site level (ww_geo_type != geo_type) or state level

Usage

get_ww_data(
  ww_data_source,
  geo_type,
  ww_data_type,
  ww_target_type,
  ww_geo_type,
  ww_data_path,
  dates_for_ww_removal = c(),
  states_for_ww_removal = c(),
  ...
)

Arguments

ww_data_path

Value

dataframe with observed viral concentrations at the geographic level specified and weekly temporal granularity. Dates correspond to the middle of the week. Will be used to map to hospitalization data.