Skip to contents

Plot of site-level Rt

Usage

get_rt_subpop_level(
  df,
  figure_file_path,
  from_full_df = FALSE,
  write_files = TRUE
)

Arguments

df

dataframe of either model draws or filepath to load in model draws

figure_file_path

where to save the figure

from_full_df

if TRUE then df is draws object, if FALSE then df is a dataframe of filepaths to load in the parameter object

write_files

if TRUE then write files to specified location, if FALSE then don't

Value

plot object of R(t)s in each site with state level median overlaid