Get PRISM activity level cutpoints given disease and location
Source:R/categorize_prism.R
get_prism_cutpoints.RdGet PRISM activity level cutpoints given disease and location
Usage
get_prism_cutpoints(location, disease, as_of = lubridate::today())Arguments
- location
location(s) for which to return the cutpoints, as a two-letter abbreviation. Use us_location_recode with
location_output_format = "abbr"to convert to this format.- disease
disease(s) for which to return the cutpoints. One of
"ARI","COVID-19","Influenza", or"RSV", or an array of those values.- as_of
date for which the cutpoints are valid. Defaults to today.
Examples
get_prism_cutpoints("WA", "Influenza")
#> [[1]]
#> prop_very_low prop_low prop_moderate prop_high
#> 0.000000000 0.002766458 0.030385827 0.058005195
#> prop_very_high prop_upper_bound
#> 0.085624564 1.000000000
#>
get_prism_cutpoints(c("US", "WA"), "COVID-19")
#> [[1]]
#> prop_very_low prop_low prop_moderate prop_high
#> 0.00000000 0.00536526 0.01655255 0.02773983
#> prop_very_high prop_upper_bound
#> 0.03892712 1.00000000
#>
#> [[2]]
#> prop_very_low prop_low prop_moderate prop_high
#> 0.000000000 0.007394318 0.021019610 0.034644902
#> prop_very_high prop_upper_bound
#> 0.048270194 1.000000000
#>
get_prism_cutpoints(c("US", "WA"), c("ARI", "RSV"), as.Date("2025-01-01"))
#> [[1]]
#> prop_very_low prop_low prop_moderate prop_high
#> 0.0000000 0.1046484 0.1381816 0.1717147
#> prop_very_high prop_upper_bound
#> 0.2052479 1.0000000
#>
#> [[2]]
#> prop_very_low prop_low prop_moderate prop_high
#> 0.0000000000 0.0004551485 0.0061158985 0.0117766486
#> prop_very_high prop_upper_bound
#> 0.0174373986 1.0000000000
#>