Changelog

CFAEpiNow2Pipeline (development version)

• Adding new action to post a comment on PRs with a link to the rendered pkgdown site.
• Re-organizing GitHub workflows.
• Checks if batch pool exists. Pools are named after branches. Also allows for deletion via commit message.
• Merges workflows 1 and 2 into a single workflow.
• Now uses CFA Azure ACR and images in the workflows and Dockerfiles, etc.
• Added Docker image with all the requirements to build the package.
• Bump pre-commit hooks
• Fix bug in warning message for incomplete data read (h/t @damonbayer)
• Fit EpiNow2 model using params and fixed seed
• Removed .vscode folder from repo
• Read and apply exclusions to case data
• Data reader and processor
• Parameters read from local parquet file or files
• Additional CI bugs squashed
• Bug fixed in the updated, faster pre-commit checks
• Updated, faster pre-commit checks
• Azure Blob file download utilities
• CI running on Ubuntu only & working pkgdown deploy to Github Pages
• Initial R package with checks running in CI
• Updated DESCRIPTION and added guidelines for package authorship
• Set up README with explanation of purpose and scope
• Removed add.R placeholder
• Fix bugs in date casting caused by DuckDB v1.1.1 release
• Drop unused pre-commit hooks
• Write outputs to file
• Specify number of samples draws with iter_sampling
• Fix NOTE from missing variable name used with NSE
• Read from new parameters schema
• Fix bugs in parameter reading from local test run
• Fix bugs in parameter reading from local test run
• Add “US” as an option in state_abb