Get some basic flags on the wastewater data, for internal use and for reporting out in our metadata
Source:R/process_model_outputs.R
get_wastewater_diagnostic.RdGet some basic flags on the wastewater data, for internal use and for reporting out in our metadata
Usage
get_wastewater_diagnostic(
calib_data,
delay_thres = 21,
n_dps_thres = 5,
prop_below_lod_thres = 0.5,
sd_thres = 0.1,
mean_log_ww_value_thres = -4
)Arguments
- calib_data
The training data object susbetted to before the forecast date
- delay_thres
The maximum number of days of delay between the last wastewater data point and the forecat date, before we would flag a state as having insufficient wastewater data to inform a forecast. Default is 21
- n_dps_thres
The threshold number of data points within a single site within a state before we would flag the state as having insufficient wastewater data to inform a forecast. Default is 5
- prop_below_lod_thres
The threshold proportion of wastewater data points that can be below the LOD. If greater than this proportion of points are below the LOD, we flag the state as having insufficient wastewater data. Default is 0.5
- sd_thres
The minimum standard deviation between wastewater data points within a site. This is intended to catch when a site reports all the same values. Default is 0.1