Creating a table of compatible and potentially compatible cases

Creates a table of compatible and potentially compatible cases, with an optional parameter to run a clustering algorithm.

Usage

generate_potentially_compatibles_cluster(cases.need60day, create_cluster = F)

Arguments

cases.need60day

tibble Summary table of cases that need 60-day follow-up. This is the output of generate_60_day_table_data().

create_cluster

logical Add column for clusters? Default to FALSE.

Value

tibble A summary table of cases.

Examples

if (FALSE) { # \dontrun{
raw.data <- get_all_polio_data(attach.spatial.data = FALSE)
ctry.data <- extract_country_data("algeria", raw.data)
stool.data <- generate_stool_data(
  ctry.data$afp.all.2, "2021-01-01", "2023-12-31",
  "good", "inadequate"
)
table60.days <- generate_60_day_table_data(stool.data, "2021-01-01", "2023-12-31")
pot.c.clust <- generate_potentially_compatibles_cluster(table60.days,
  create_cluster = TRUE
)
} # }